This blog is a companion to my recent book, Exploring Data in Engineering, the Sciences, and Medicine, published by Oxford University Press. The blog expands on topics discussed in the book, and the content is heavily example-based, making extensive use of the open-source statistical software package R.

Showing posts with label long tail phenomena. Show all posts
Showing posts with label long tail phenomena. Show all posts

Sunday, October 23, 2011

The Zipf and Zipf-Mandelbrot distributions

In my last few posts, I have been discussing some of the consequences of the slow decay rate of the tail of the Pareto type I distribution, along with some other, closely related notions, all in the context of continuously distributed data.  Today’s post considers the Zipf distribution for discrete data, which has come to be extremely popular as a model for phenomena like word frequencies, city sizes, or sales rank data, where the values of these quantities associated with randomly selected samples can vary by many orders of magnitude.

More specifically, the Zipf distribution is defined by a probability pi of observing the ith element of an infinite sequence of objects in a single random draw from that sequence, where the probability is given by:

           
pi = A/ia

Here, a is a positive number greater than 1 that determines the rate of the distribution’s tail decay, and A is a normalization constant, chosen so that these probabilities sum to 1.  Like the continuous-valued Pareto type I distribution, the Zipf distribution exhibits a “long tail,” meaning that its tail decays slowly enough that in a random sample of objects Oi drawn from a Zipf distribution, some very large values of the index i will be observed, particularly for relatively small values of the exponent a.  In one of the earliest and most common applications of the Zipf distribution, the objects considered represent words in a document and i represents their rank, ranging from most frequent (for i = 1) to rare (for large i ).   In a more business-oriented application, the objects might be products for sale (e.g., books listed on Amazon), with the index i corresponding to their sales rank.  For a fairly extensive collection of references to many different applications of the Zipf distribution, the website (originally) from Rockefeller University is an excellent source.

In Exploring Data in Engineering, the Sciences, and Medicine, I give a brief discussion of both the Zipf distribution and the closely related Zipf-Mandelbrot distribution discussed by Beniot Mandelbrot in his book The Fractal Geometry of Nature.  The probabilities defining this distribution may be parameterized in several ways, and the one given in Exploring Data is:

           
pi = A/(1+Bi)a

where again a is an exponent that determines the rate at which the tail of the distribution decays, and B is a second parameter with a value that is strictly positive but no greater than 1.  For both the Zipf distribution and the Zipf-Mandelbrot distribution, the exponent a must be greater than 1 for the distribution to be well-defined, it must be greater than 2 for the mean to be finite, and it must be greater than 3 for the variance to be finite.

So far, I have been unable to find an R package that supports the generation of random samples drawn from the Zipf distribution, but the package zipfR includes the command rlnre, which generates random samples drawn from the Zipf-Mandelbrot distribution.  As I noted, this distribution can be parameterized in several different ways and, as Murphy’s law would have it, the zipfR parameterization is not the same as the one presented above and discussed in Exploring Data.  Fortunately, the conversion between these parameters is simple.  The zipfR package defines the distribution in terms of a parameter alpha that must lie strictly between 0 and 1, and a second parameter B that I will call BzipfR to avoid confusion with the parameter B in the above definition.  These parameters are related by:

           
alpha = 1/a    and    BzipfR = (a-1) B

Since the a parameter (and thus the alpha parameter in the zipfR package) determines the tail decay rate of the distribution, it is of the most interest here, and the rest of this post will focus on three examples: a = 1.5 (alpha = 2/3), for which both the distribution’s mean and variance are infinite, a = 2.5 (alpha = 2/5), for which the mean is finite but the variance is not, and a = 3.5 (alpha = 2/7), for which both the mean and variance are finite.  The value of the parameter B in the Exploring Data definition of the distribution will be fixed at 0.2 in all of these examples, corresponding to values of BzipfR = 0.1, 0.3, and 0.5 for the three examples considered here.

To generate Zipf-Mandelbrot random samples, the zipfR package uses the procedure rlnre in conjunction with the procedure lnre (the abbreviation “lnre” stands for “large number of rare events” and it represents a class of data models that includes the Zipf-Mandelbrot distribution).  Specifically, to generate a random sample of size N = 100 for the first case considered here, the following R code is executed:

> library(zipfR)
> ZM = lnre(“zm”, alpha = 2/3, B = 0.1)
> zmsample = rlnre(ZM, n=100)

The first line loads the zipfR library (which must first be installed, of course, using the install.packages command), the second line invokes the lnre command to set up the distribution with the desired parameters, and the last line invokes the rlnre command to generate 100 random samples from this distribution.  (As with all R random number generators, the set.seed command should be used first to initialize the random number generator seed if you want to get repeatable results; for the results presented here, I used set.seed(101).)  The sample returned by the rlnre command is a vector of 100 observations, which have the “factor” data type, although their designations are numeric (think of the factor value “1339” as meaning “1 sample of object number 1339”).  In the results I present here, I have converted these factor responses to numerical ones so I can interpret them as numerical ranks.  This conversion is a little subtle: simply converting from factor to numeric values via something like “zmnumeric = as.numeric(zmsample)” almost certainly doesn’t give you what you want: this will convert the first-ocurring factor value (which has a numeric label, say “1339”) into the number 1, convert the second-occurring value (since this is a random sequence, this might be “73”) into the number 2, etc.  To get what you want (e.g., the labels “1339” and “73” assigned to the numbers 1339 and 73, respectively), you need to first convert the factors in zmsample into characters and then convert these characters into numeric values:

           
zmnumeric = as.numeric(as.character(zmsample))


The three plots below show random samples drawn from each of the three Zipf-Mandelbrot distributions considered here.  In all cases, the y-axis corresponds to the number of times the object labeled i was observed in a random sample of size N = 100 drawn from the distribution with the indicated exponent.  Since the range of these indices can be quite large in the slowly-decaying members of the Zipf-Mandelbrot distribution family, the plots are drawn with logarithmic x-axes, and to facilitate comparisons, the x-axes have the same range in all three plots, as do the y-axes.  In all three plots, object i = 1 occurs most often – about a dozen times in the top plot, two dozen times in the middle plot, and three dozen times in the bottom plot – and those objects with larger indices occur less frequently.  The major difference between these three examples lies in the largest indices of the objects seen in the samples: we never see an object with index greater than 50 in the bottom plot, we see only two such objects in the middle plot, while more than a third of the objects in the top plot meet this condition, with the most extreme object having index i = 115,116. 



As in the case of the Pareto type I distributions I discussed in several previous posts – which may be regarded as the continuous analog of the Zipf distribution – the mean is generally not a useful characterization for the Zipf distribution.  This point is illustrated in the boxplot comparison presented below, which summarizes the means computed from 1000 statistically independent random samples drawn from each of the three distributions considered here, where the object labels have been converted to numerical values as described above.  Thus, the three boxplots on the left represent the means – note the logarithmic scale on the y-axis – of these index values i generated for each random sample.  The extreme variability seen for Case 1 (a = 1.5) reflects the fact that neither the mean nor the variance are finite for this case, and the consistent reduction in the range of variability for Cases 2 (a = 2.5, finite mean but infinite variance) and 3 (a = 3.5, finite mean and variance) reflects the “shortening tail” of this distribution with increasing exponent a.  As I discussed in my last post, a better characterization than the mean for distributions like this is the “95% tail length,” corresponding to the 95% sample quantile. Boxplots summarizing these values for the three distributions considered here are shown to the right of the dashed vertical line in the plot below.  In each case, the range of variation seen here is much less extreme for the 95% tail length than it is for the mean, supporting the idea that this is a better characterization for data described by Zipf-like discrete distributions.



Other alternatives to the (arithmetic) mean that I discussed in conjunction with the Pareto type I distribution were the sample median, the geometric mean, and the harmonic mean.  The plot below compares these four characterizations for 1000 random samples, each of size N = 100, drawn from the Zipf-Mandelbrot distribution with a = 3.5 (the third case), for which the mean is well-defined.  Even here, it is clear that the mean is considerably more variable than these other three alternatives.



Finally, the plot below shows boxplot comparisons of these alternative characterizations – the median, the geometric mean, and the harmonic mean – for all three of the distributions considered here.  Not surprisingly, Case 1 (a = 1.5) exhibits the largest variability seen for all three characterizations, but the harmonic mean is much more consistent for this case than either the geometric mean or the median.  In fact, the same observation holds – although less dramatically – for Case 2 (a = 2.5), and the harmonic mean appears more consistent than the geometric mean for all three cases.  This observation is particularly interesting in view of the connection between the harmonic mean and the reciprocal transformation, which I will discuss in more detail next time.



Wednesday, September 28, 2011

Is the “Long Tail” a Useless Concept?

In response to my last post, “The Long Tail of the Pareto Distribution,” Neil Gunther had the following comment:

           
Unfortunately, you've fallen into the trap of using the ‘long tail’ misnomer. If you think about it, it can't possibly be the length of the tail that sets distributions like Pareto and Zipf apart; even the negative exponential and Gaussian have infinitely long tails.”

He goes on to say that the relevant concept is the “width” or the “weight” of the tails that is important, and that a more appropriate characterization of these “Long Tails” would be “heavy-tailed” or “power-law” distributions.

Neil’s comment raises an important point: while the term “long tail” appears a lot in both the on-line and hard-copy literature, it is often somewhat ambiguously defined.  For example, in his book, The Long Tail, Chris Anderson offers the following description (page 10):

           
“In statistics, curves like that are called ‘long-tailed distributions’ because the tail of the curve is very long relative to the head.”

The difficulty with this description is that it is somewhat ambiguous since it says nothing about how to measure “tail length,” forcing us to adopt our own definitions.  It is clear from Neil’s comments that the definition he adopts for “tail length” is the width of the distribution’s support set.  Under this definition, the notion of a “long-tailed distribution” is of extremely limited utility: the situation is exactly as Neil describes it, with “long-tailed distributions” corresponding to any distribution with unbounded support, including both distributions like the Gaussian and gamma distribution where the mean is a reasonable characterization, and those like the Cauchy and Pareto distribution where the mean doesn’t even exist. 

The situation is analogous to that of confidence intervals, which characterize the uncertainty inherited by any characterization computed from a collection of uncertain (i.e., random) data values.  As a specific example consider the mean: the sample mean is the arithmetic average of N observed data samples, and it is generally intended as an estimate of the population mean, defined as the first moment of the data distribution.  A q% confidence interval around the sample mean is an interval that contains the population mean with probability at least q%.  These intervals can be computed in various ways for different data characterizations, but the key point here is that they are widely used in practice, with the most popular choices being the 90%, 95% and 99% confidence intervals, which necessarily become wider as this percentage q increases.  (For a more detailed discussion of confidence intervals, refer to Chapter 9 of Exploring Data in Engineering, the Sciences, and Medicine.)  We can, in principle, construct 100% confidence intervals, but this leads us directly back to Neil’s objection: the 100% confidence interval for the mean is entire support set of the distribution (e.g., for the Gaussian distribution, this 100% confidence interval is the whole real line, while for any gamma distribution, it is the set of all positive numbers).  These observations suggest the following notion of “tail length” that addresses Neil’s concern while retaining the essential idea of interest in the business literature: we can compare the “q% tail length” of different distributions for some q less than 100.

In particular, consider the case of J-shaped distributions, defined as those like the Pareto type I distribution whose distribution p(x) decays monotonically with increasing x, approaching zero as x goes to infinity.  The plot below shows two specific examples to illustrate the idea: the solid line corresponds to the (shifted) exponential distribution:

            p(x) = e–(x-1)

for all x greater than or equal to 1 and zero otherwise, while the dotted line represents the Pareto type I distribution with location parameter k = 1 and shape parameter a = 0.5 discussed in my last post.  Initially, as x increases from 1, the exponential density is greater than the Pareto density, but for x larger than about 3.5, the opposite is true: the exponential distribution rapidly becomes much smaller, reflecting its much more rapid rate of tail decay.



For these distributions, define the q% tail length to be the distance from the minimum possible value of x (the “head” of the distribution; here, x = 1) to the point in the tail where the cumulative probability reaches q% (i.e., the value xq where x < xq with probability q%).  In practical terms, the q% tail length tells us how far out we have to go in the tail to account for q% of the possible cases.  In R, this value is easy to compute using the quantile function included in most families of available distribution functions.  As a specific example, for the Pareto type I distribution, the function qparetoI in the VGAM package gives us the desired quantiles for the distribution with specified values of the parameters k (designated “scale” in the qparetoI call) and a (designated “shape” in the qparetoI call).  Thus, for the case k = 1 and a = 0.5 (i.e., the dashed curve in the above plot), the “90% tail length” is given by:

> qparetoI(p=0.9,scale=1,shape=0.5)
[1] 100
>

For comparison, the corresponding shifted exponential distribution has the 90% tail length given by:

> 1 + qexp(p = 0.9)
[1] 3.302585
>

(Note that here, I added 1 to the exponential quantile to account for the shift in its domain from “all positive numbers” – the domain for the standard exponential distribution – to the shifted domain “all numbers greater than 1”.)  Since these 90% tail lengths differ by a factor of 30, they provide a sound basis for declaring the Pareto type I distribution to be “longer tailed” than the exponential distribution.

These results also provide a useful basis for assessing the influence of the decay parameter a for the Pareto distribution.  As I noted last time, two of the examples I considered did not have finite means (a = 0.5 and 1.0), and none of the four had finite variances (i.e., also a = 1.5 and 2.0), rendering moment characterizations like the mean and standard deviation fundamentally useless.  Comparing the 90% tail lengths for these distributions, however, leads to the following results:

            a = 0.5: 90% tail length = 100.000
            a = 1.0: 90% tail length =   10.000
            a = 1.5: 90% tail length =     4.642
            a = 2.0: 90% tail length =     3.162

It is clear from these results that the shape parameter a has a dramatic effect on the 90% tail length (in fact, on the q% tail length for any q less than 100).  Further, note that the 90% tail length for the Pareto type I distribution with a = 2.0 is actually a little bit shorter than that for the exponential distribution.  If we move further out into the tail, however, this situation changes.  As a specific example, suppose we compare the 98% tail lengths. For the exponential distribution, this yields the value 4.912, while for the four Pareto shape parameters we have the following results:

            a = 0.5: 98% tail length = 2,500.000
            a = 1.0: 98% tail length =      50.000
            a = 1.5: 98% tail length =      13.572
            a = 2.0: 98% tail length =        7.071

This value (i.e., the 98% tail length) seems a particularly appropriate choice to include here since in his book, The Long Tail, Chris Anderson notes that his original presentations on the topic were entitled “The 98% Rule,” reflecting the fact that he was explicitly considering how far out you had to go into the tail of a distribution of goods (e.g., the books for sale by Amazon) to account for 98% of the sales.

Since this discussion originally began with the question, “when are averages useless?” it is appropriate to note that, in contrast to the much better-known average, the “q% tail length” considered here is well-defined for any proper distribution.   As the examples discussed here demonstrate, this characterization also provides a useful basis for quantifying the “Long Tail” behavior that is of increasing interest in business applications like Internet marketing.  Thus, if we adopt this measure for any q value less than 100%, the answer to the title question of this post is, “No: The Long Tail is a useful concept.”

The downside of this minor change is that – as the results shown here illustrate – the results obtained using the q% tail length depend on the value of q we choose.  In my next post, I will explore the computational issues associated with that choice.

Saturday, September 17, 2011

The Long Tail of the Pareto Distribution

In my last two posts, I have discussed cases where the mean is of little or no use as a data characterization.  One of the specific examples I discussed last time was the case of the Pareto type I distribution, for which the density is given by:

                        p(x) = aka/xa+1

defined for all x > k, where k and a are numeric parameters that define the distribution.  In the example I discussed last time, I considered the case where a = 1.5, which exhibits a finite mean (specifically, the mean is 3 for this case), but an infinite variance.  As the results I presented last time demonstrated, the extreme data variability of this distribution renders the computed mean too variable to be useful.  Another reason this distribution is particularly interesting is that it exhibits essentially the same tail behavior as the discrete Zipf distribution; there, the probability that a discrete random variable x takes its ith value is:

                        pi = A/ic,

where A is a normalization constant and c is a parameter that determines how slowly the tail decays.  This distribution was originally proposed to characterize the frequency of words in long documents (the Zipf-Estoup law), it was investigated further by Zipf in the mid-twentieth century in a wide range of applications (e.g., the distributions of city sizes), and it has become the subject of considerable recent attention as a model for “long-tailed” business phenomena (for a non-technical introduction to some of these business phenomena, see the book by Chris Anderson, The Long Tail).  I will discuss the Zipf distribution further in a later post, but one of the reasons for discussing the Pareto type I distribution first is that since it is a continuous distribution, the math is easier, meaning that more characterization results are available for the Pareto distribution. 



The mean of the Pareto type I distribution is:

                        Mean = ak/(a-1),

provided a > 1, and the variance of the distribution is finite only if a > 2.  Plots of the probability density defined above for this distribution are shown above, for k = 1 in all cases, and with a taking the values 0.5, 1.0, 1.5, and 2.0.  (This is essentially the same plot as Figure 4.17 in Exploring Data in Engineering, the Sciences, and Medicine, where I give a brief description of the Pareto type I distribution.)  Note that all of the cases considered here are characterized by infinite variance, while the first two (a = 0.5 and 1.0) are also characterized by infinite means.  As the results presented below emphasize, the mean represents a very poor characterization in practice for data drawn from any of these distributions, but there are alternatives, including the familiar median that I have discussed previously, along with two others that are more specific to the Pareto type I distribution: the geometric mean and the harmonic mean. 

The plot below emphasizes the point made above about the extremely limited utility of the mean as a characterization of Pareto type I data, even in cases where it is theoretically well-defined.  Specifically, this plot compares the four characterizations I discuss here – the mean (more precisely known as the “arithmetic mean” to distinguish it from the other means considered here), the median, the geometric mean, and the harmonic mean – for 1000 statistically independent Pareto type I data sequences, each of length N = 400, with parameters k = 1 and a = 2.0.  For this example, the mean is well-defined (specifically, it is equal to 2), but compared with the other data characterizations, its variability is much greater, reflecting the more serious impact of this distribution’s infinite variance on the mean than on these other data characterizations.



To give a more complete view of the extreme variability of the arithmetic mean, boxplots of 1000 statistically independent samples drawn from all four of the Pareto type I distribution examples plotted above are shown in the boxplots below.  As before, each sample is of size N = 400 and the parameter k has the value 1, but here the computed arithmetic means are shown for the parameter values a = 0.5, 1.0, 1.5, and 2.0; note the log scale used here because the range of computed means is so large.  For the first two of these examples, the population mean does not exist, so it is not surprising that the computed values span such an enormous range, but even when the mean is well-defined, the influence of the infinite variance of these cases is clearly evident.  It may be argued that infinite variance is an extreme phenomenon, but it is worth emphasizing here that for the specific “long tail” distributions popular in many applications, the decay rate is sufficiently slow for the variance – and sometimes even the mean – to be infinite, as in these examples.



As I have noted several times in previous posts, the median is much better behaved than the mean, so much so that it is well-defined for any proper distribution.  One of the advantages of the Pareto type I distribution is that the form of the density function is simple enough that the median of the distribution can be computed explicitly from the distribution parameters.  This result is given in the fabulous book by Johnson, Kotz and Balakrishnan that I have mentioned previously, which devotes an entire chapter (Chapter 20) to the Pareto family of distributions.  Specifically, the median of the Pareto type I distribution with parameters k and a is given by:

                        Median = 21/ak

Thus, for the four examples considered here, the median values are 4.0 (for a = 0.5), 2.0 (for a = 1.0), 1.587 (for a = 1.5), and 1.414 (for a = 2.0).  Boxplot summaries for the same 1000 random samples considered above are shown in the plot below, which also includes horizontal dotted lines at these theoretical median values for the four distributions.  The fact that these lines correspond closely with the median lines in the boxplots gives an indication that the computed median is, on average, in good agreement with the correct values it is attempting to estimate.  As in the case of the arithmetic means, the variability of these estimates decreases monotonically as a increases, corresponding to the fact that the distribution becomes generally better-behaved as the a parameter increases.



The geometric mean is an alternative characterization to the more familiar arithmetic mean, one that is well-defined for any sequence of positive numbers.  Specifically, the geometric mean of N positive numbers is defined as the Nth root of their product.  Equivalently, the geometric mean may be computed by exponentiating the arithmetic average of the log-transformed values.  In the case of the Pareto type I distribution, the utility of the geometric mean is closely related to the fact that the log transformation converts a Pareto-distributed random variable into an exponentially distributed one, a point that I will discuss further in a later post on data transformations.  (These transformations are the topic of Chapter 12 of Exploring Data, where I briefly discuss both the logarithmic transformation on which the geometric mean is based and the reciprocal transformation on which the harmonic mean is based, described next.)   The key point here is that the following simple expression is available for the geometric mean of the Pareto type I distribution (Johnson, Kotz, and Balakrishnan, page 577):

                        Geometric Mean = k exp(1/a)

For the four specific examples considered here, these geometric mean values are approximately 7.389 (for a = 0.5), 2.718 (for a = 1.0), 1.948 (for a = 1.5), and 1.649 (for a = 2.0).  The boxplots shown below summarize the range of variation seen in the computed geometric means for the same 1000 statistically independent samples considered above.  Again, the horizontal dotted lines indicate the correct values for each distribution, and it may be seen that the computed values are in good agreement, on average.  As before, the variability of these computed values decreases with increasing a values as the distribution becomes better-behaved.



The fourth characterization considered here is the harmonic mean, again appropriate to positive values, and defined as the reciprocal of the average of the reciprocal data values.  In the case of the geometric mean just discussed, the log transformation on which it is based is often useful in improving the distributional character of data values that span a wide range.  In the case of the Pareto type I distribution – and a number of others – the reciprocal transformation on which the harmonic mean is based also improves the behavior of the data distribution, but this is often not the case.  In particular, reciprocal transformations often make the character of a data distribution much worse: applied to the extremely well-behaved standard uniform distribution, it yields the Pareto type I distribution with a = 1, for which none of the integer moments exist; similarly, applied to the Gaussian distribution, the reciprocal transformation yields a result that is both infinite variance and bimodal.  (A little thought suggests that the reciprocal transformation is inappropriate for the Gaussian distribution because it is not strictly positive, but normality is a favorite working assumption, sometimes applied to the denominators of ratios, leading to a number of theoretical difficulties.  I will have more to say about that in a future post.)  For the case of the Pareto type I distribution, the reciprocal transformation converts it into the extremely well-behaved beta distribution, and the harmonic mean has the following simple expression:

            Harmonic mean = k(1 + a-1)

For the four examples considered here, this expression yields harmonic mean values of 3 (for a = 0.5), 2 (for a = 1.0), 1.667 (for a = 1.5), and 1.5 (for a = 2.0).  Boxplot summaries of the computed harmonic means for the 1000 simulations of each case considered previously are shown below, again with dotted horizontal lines at the theoretical values for each case.  As with both the median and the geometric mean, it is clear from these plots that the computed values are correct on average, and their variability decreases with increasing values of the a parameter.



The key point of this post has been to show that, while averages are not suitable characterizations for “long tailed” phenomena that are becoming an increasing subject of interest in many different fields, useful alternatives do exist.  For the case of the Pareto type I distribution considered here, these alternatives include the popular median, along with the somewhat less well-known geometric and harmonic means.  In an upcoming post, I will examine the utility of these characterizations for the Zipf distribution.